Research Paper

Morphological and phylogenetic studies of Lycoperdon rupicola: first report for the Indian mycobiota

Dyutiparna Chakraborty, Kanad Das, Abhishek Baghela, Nikita Mehta, Sanjay Kumar Singh, Sobhan Kumar Mukherjee and Rui Lin Zhao

Published on: 22 February 2017

Page: 93 - 98

DOI: 10.6165/tai.2017.62.93

  • BibTeX
    •
  • EndNote
    •
  • RIS
    •

    Abstract

    Lycoperdon rupicola Jeppson, E. Larss. & M.P. Martín growing on mossy bed attached to rocks or soil, is reported here for the first time from India with its morphological details, supporting illustrations and phylogenetic evidences. Similar looking or allied taxa are compared. The ITS- and LSU-rDNA based phylogenetic analysis of our collection also confirms its conspecificity with its European counterpart.

    Keyword: Agaricales, India, Macrofungi, New record, Phylogeny, Taxonomy

    Literature Cited

    Moyersoen, B. and V. Demoulin.1996. Les Gast?romyc?tes de Corse: taxonomie, ?cologie, chorologie. Lejeunia, n. s., 152, 128 pp.

    Moncalvo, J.-M., R. Vilgalys, S.A. Redhead, J.E. Johnson, T.Y. James, M.C. Aime, V. Hofstetter, S. Verduin, E. Larsson, T.J. Baroni, R.G. Thorn, S. Jacobsson, H. Clemencon and O.K. Miller.2002. One hundred and seventeen clades of euagarics.Mol. Phylogenet. Evol. 23: 357
    DOI: 10.1016/S1055-7903(02)00027-1View Article Google Scholar

    Kreisel, H. 1969. Gasteromycetenaus Nepal. Khumbu Himal. 6(1): 25

    Miller, O.K.Jr. and H.H. Miller. 1988. Gasteromycetes: morphological and development features with keys to the orders, families and genera, Mad River Press, CA, USA.?

    Kreisel, H. 1962. Die Lycoperdaceae der Deutschen Demokratischen Republik, Feddes Repert. 64: 89

    Kornerup, A. and J.H. Wanscher. 1978. Methuen handbook of color, 3rd Ed., Eyre Methuen Ltd., London, UK.

    Bisht, D. 2008. Gasteromycetes (Lycoperdales& related fungi) of Uttarakhand (an unpublished report), Botanical Survey of India, NRC, Dehradun.

    Buzina, W., D. Lang-Loidolt, H. Braun, K. Freudenschuss and H. Stammberger. 2001.Development of molecular methods for identification of Schizophyllum commune from clinical samples. J. Clin. Microbiol. 39(7): 2391
    DOI: 10.1128/JCM.39.7.2391-2396.2001View Article Google Scholar

    Demoulin, V. 1968. Gast?romyc?tes de Belgique: Sclerodermatales, Tulostomatales, Lycopedales, Bull. Jard. Bot. nat. Belgique 38(1): 1
    DOI: 10.2307/3667475View Article Google Scholar

    Demoulin, V. 1971. Le genre Lycoperdonen Europe et en Am?rique du Nord, 284 pp. (Doctoral Thesis) University of Li?ge, 284 pp.

    Demoulin, V. 1973. Definition and typification of the genus Lycoperdon Tourn. per Pers. (Gasteromycetes), Persoonia 7: 151

    Edgar, R.C. 2004a. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5): 1792
    DOI: 10.1093/nar/gkh340View Article Google Scholar

    Edgar, R.C. 2004b. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113.

    Gascuel, O. 1997. BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Mol. Biol. Evol. 14: 685
    DOI: 10.1093/oxfordjournals.molbev.a025808View Article Google Scholar

    Hibbett, D.S. and R.G. Thorn. 2001. Basidiomycota: Homobasidiomycetes. In The Mycota. Systematics and Evolution, vol. 7., Part B. Edited by D.J. McLaughlin, E.G. McLaughlin and P.A. Lemke. Springer-Verlag, New York, pp. 121
    DOI: 10.1007/978-3-662-10189-6_5View Article Google Scholar

    Holmgren, P.K., N.H. Holmgren and L.C. Barnett 1990. Index Herbariorum. Part 1: Herbaria of the world, 86th Ed., Bronx: New York Botanical Garden, USA.

    Jeppson, M. 2006. The genus Lycoperdon in Greenland and Svalbard. In Arctic and alpine mycology 6. Meddelelser om Gr?nland. BioScience.Edited by D. Boertmann and H. Knudsen, pp. 106

    Jeppson, M., E. Larsson, and M.P. Mart?n. 2012. Lycoperdon rupicola and L. subumbrinum: two new puffballs from Europe. Mycol.Prog. 11(4): 887
    DOI: 10.1007/s11557-011-0804-8View Article Google Scholar

    Kirk, P.M., P.F. Cannon, D.W. Minter and J.A. Stalpers. 2008. Ainsworth & Bisby
    DOI: 10.1016/B978-0-444-98966-6.50014-9View Article Google Scholar

    Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16(2):111
    DOI: 10.1007/BF01731581View Article Google Scholar

    Pegler, D. N., T. L?ss?e, and B.M. Spooner. 1995. British puffballs, earthstars and stinkhorns: an account of the British gasteroid fungi, Royal Botanic Garden, Kew, UK.

    Saitou N. and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.

    Tamura, K., M. Nei and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. PNAS 101(30):11030
    DOI: 10.1073/pnas.0404206101View Article Google Scholar

    Tamura, K., G. Stecher, D. Peterson, A. Filipski and S. Kumar. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol. Biol. Evol. 30: 2725
    DOI: 10.1093/molbev/mst197View Article Google Scholar

    White, T.J., T. Bruns, S. Lee, and J. Taylor.1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, T.J. (Eds.) PCR Protocols: a guide to method and applications. Academic Press, San Diego, pp. 315
    DOI: 10.1016/B978-0-12-372180-8.50042-1View Article Google Scholar